A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

O

O - Static variable in class conformation.Dssp

OutPDB - class io.pdb.OutPDB.

OutPDB(String) - Constructor for class io.pdb.OutPDB

OutPDB(String, String) - Constructor for class io.pdb.OutPDB

OutPosG96 - class io.g96.out.OutPosG96.

OutPosG96(String) - Constructor for class io.g96.out.OutPosG96

OutPosG96(String, String) - Constructor for class io.g96.out.OutPosG96

OutTopoG96 - class io.g96.out.OutTopoG96.

OutTopoG96(Particles, SimSystem, InteractionParameters, String) - Constructor for class io.g96.out.OutTopoG96

OutTopoG96() - Constructor for class io.g96.out.OutTopoG96

OutTrajG96 - class io.g96.out.OutTrajG96.

OutTrajG96() - Constructor for class io.g96.out.OutTrajG96

OutTrajG96(String) - Constructor for class io.g96.out.OutTrajG96

OutTrajG96(String, String) - Constructor for class io.g96.out.OutTrajG96

OutVMDAM - class io.vmd.OutVMDAM.

OutVMDAM(String) - Constructor for class io.vmd.OutVMDAM

OutVMDAM(String, String) - Constructor for class io.vmd.OutVMDAM

OutXPlor - class io.xplor.OutXPlor.

Output X-PLOR crystallographic map files.

OutXPlor(String) - Constructor for class io.xplor.OutXPlor

OutXPlor(String, String) - Constructor for class io.xplor.OutXPlor

occurences - Variable in class conformation.HydrogenBonds.HBTrajectoryStats

occurrences - Variable in class conformation.HydrogenBonds.HBFrameStats

open(String) - Method in class io.g96.in.InBlock

optionalL - Variable in class contrib.PrintfFormat.ConversionSpecification

Flag specifying that a following e, E, f, g, or G conversion character applies to a type double argument.

optionalh - Variable in class contrib.PrintfFormat.ConversionSpecification

Flag specifying that a following d, i, o, u, x, or X conversion character applies to a type short int.

optionall - Variable in class contrib.PrintfFormat.ConversionSpecification

Flag specifying that a following d, i, o, u, x, or X conversion character applies to a type lont int argument.

origPtr - Variable in class contrib.CBZip2InputStream

origin - Static variable in class esraMath.Fit

out - Variable in class energy.FD_WriteGrid

out - Variable in class io.g96.out.G96PositionFormatter

out - Variable in class io.g96.out.G96PositionredFormatter

out - Variable in class io.vmd.VMDAMFormatter

outFile - Variable in class io.TrajectoryWriter

outer(double[], double[]) - Static method in class esraMath.BLA

Compute the outer product of two vectors r1, r2.