A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

J

J - Variable in class forcefield.Angles

Atom j of bond-angle[num].

J - Variable in class forcefield.Bonds

Atom j of bond[num].

J - Variable in class forcefield.Dihedrals

Atom j of dihedral-angle torsion[num].

J - Variable in class forcefield.ImproperDihedrals

Atom j of improper dihedral-angle[num].

J - Variable in class forcefield.LJType

j2 - Variable in class contrib.CBZip2InputStream

join(Particles) - Method in class core.Particles

Joins two sets of particles.

join(Bonds, int) - Method in class forcefield.Bonds

Join this set of bonds with a set of bonds of another molecule.

join(String[]) - Static method in class stuff.StringUtils

join(String[], String) - Static method in class stuff.StringUtils

joins an array of strings using the glue string.

joinExclusive(ArrayList, ArrayList) - Static method in class core.AtomSpecifier

Join two ArrayLists, removing non-unique elements.