Uses of Class
forcefield.Dihedrals

Packages that use Dihedrals

core
energy
io.g96.in
io.g96.out

Uses of Dihedrals in core

Fields in core declared as Dihedrals

Dihedrals	SimSystem.dihh All Dihedrals involving hydrogen atoms.
Dihedrals	SimSystem.dih All Dihedrals involving non-hydrogen atoms.

Uses of Dihedrals in energy

Fields in energy declared as Dihedrals

private Dihedrals	Energy_Dihedral.dihh
private Dihedrals	Energy_Dihedral.dih

Methods in energy with parameters of type Dihedrals

protected double

Energy_Dihedral.calc(Dihedrals dihedrals) protected void Method calc evaluates the dihedral force as (GROMOS96 manual pages II-25ff):

Uses of Dihedrals in io.g96.in

Methods in io.g96.in that return Dihedrals

static Dihedrals

InTopoG96.parseDihedralBlock(java.util.ArrayList block, java.util.Hashtable dihedralType)

Uses of Dihedrals in io.g96.out

Methods in io.g96.out with parameters of type Dihedrals

private void

OutTopoG96.printdih(java.lang.String type, Dihedrals dh)