energy
Class Energy_Bond

java.lang.Object
  energy.Energy
      energy.Energy_Bond

All Implemented Interfaces:

InteractionsEnergy, java.lang.Runnable

public class Energy_Bond

extends Energy

implements java.lang.Runnable, InteractionsEnergy

Field Summary

private Bonds	bo
private Bonds	boh
private double	vbond

Fields inherited from class energy.Energy

atoms, DIM, interactionsEnergy, size, sys

Constructor Summary

Energy_Bond(Particles atoms, SimSystem sys)
The Energy_Bond class constructor.

Method Summary

protected double	calc(Bonds bonds) protected void Method calc evaluates the Bond Energy as (GROMOS96 manual pages II-12ff):
void	run() public void Method run calls protected void Method calc.

Methods inherited from class energy.Energy

calcEnergy

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

boh

private final Bonds boh

bo

private final Bonds bo

vbond

private double vbond

Constructor Detail

Energy_Bond

public Energy_Bond(Particles atoms,
                   SimSystem sys)

The Energy_Bond class constructor.

Method Detail

run

public void run()

public void Method run calls protected void Method calc. It also serves as the interface for the thread start.

Specified by:

run in interface java.lang.Runnable

calc

protected double calc(Bonds bonds)

protected void Method calc evaluates the Bond Energy as (GROMOS96 manual pages II-12ff):

Parameters:

bonds - A Bonds object