AlkaneDihedrals
AlkaneDihedralsTest
Angles
ArgumentChecker
ArgumentComparer
ArgumentDescription
ArgumentGetter
ArgumentParser
ArgumentTypeSpec
ArgumentValueSpec
AtomSpecifier
BLA
BLA_test
BZip2Constants
BondAngleType
BondType
Bonds
BondsTest
Bornradii_STILL
CBZip2InputStream
CRC
DenseExclusions
DihedralType
Dihedrals
Dssp
DsspTest
Energy
Energy_Angle
Energy_Bond
Energy_Dihedral
Energy_GBorn
Energy_ImpDihedral
FDPoissonBoltzmann
FDPoissonBoltzmannTest
FDPoissonBoltzmann_Boundary
FDPoissonBoltzmann_ChargeGrid
FDPoissonBoltzmann_EpsGrid
FDPoissonBoltzmann_ICCG
FDPoissonBoltzmann_ICCG_NPBC
FDPoissonBoltzmann_Parameters
FD_WriteGrid
Fit
FitTest
G96BoxFormatter
G96Frame
G96GenericFormatter
G96PositionFormatter
G96PositionredFormatter
G96SolventTopology
G96TimestepFormatter
G96TitleFormatter
Geometry
GeometryTest
HBondFormatter
HydrogenBonds
ImpDihedralType
ImproperDihedrals
InBlock
InCorG96
InEnergiesG96
InEnergiesG96.G96Energies
InMol2
InMol2Test
InPDB
InTopoG96
InTopoG96Test
InTrajG96
InteractionParameters
InteractionsEnergy
LJ14HashMap
LJType
LJTypeHashMap
NearestImage
OutPDB
OutPosG96
OutTopoG96
OutTrajG96
OutVMDAM
OutXPlor
PBC
PBC.Gatherer
PBC_RectBox
PBC_TruncOct
PDBAtomFormatter
PDBTitleFormatter
Particles
PositionUtils
PrintfFormat
pb_protligand
RingConformation
RingConformationTest
SimSystem
Statistics
StringUtils
TrajectoryWriter
VMDAMFormatter
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